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FAIRDOM approach for semantic interoperability of systems biology data and models

  • Olga Krebs
  • , Katy Wolstencroft
  • , Natalie Stanford
  • , Norman Morrison
  • , Martin Golebiewski
  • , Rostyk Kuzyakiv
  • , Stuart Owen
  • , Quyen Nguyen
  • , Jacky Snoep
  • , Wolfgang Mueller
  • , Carole Goble
  • Heidelberg Institute for Theoretical Studies
  • University of Manchester
  • University of Zurich

Research output: Contribution to conferencePaperAcademic

Abstract

Motivation: The ability to collect and interlink heterogeneous data and model collections is essential in systems biology. Effec-tive data exchange and comparison requires sufficient data anno-tation. This is particularly apparent in systems biology, where data heterogeneity means that multiple community metadata stand-ards are required for the annotation of a whole investigation, in-cluding data, models and protocols. Results: FAIRDOM (http://fair-dom.org/) is an initiative to enable the systems biology community to produce and publish FAIR Data, Operating procedures and Models. It allows research as-sets to be aggregated, interlinked and shared in the context of the systems biology investigations that produced them. Here we pre-sent the FAIRDOM strategy in the context of semantic data inte-gration, and how it supports the whole life cycle of data collection, annotation, sharing and reuse of systems biology data and re-sources.

Original languageEnglish
Publication statusPublished - 30 Sept 2016
Event7th Workshop on Ontologies and Data in Life Sciences, ODLS 2016 - Halle (Saale), Germany
Duration: 29 Sept 201630 Sept 2016

Conference

Conference7th Workshop on Ontologies and Data in Life Sciences, ODLS 2016
Country/TerritoryGermany
CityHalle (Saale)
Period29/09/201630/09/2016

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