Evolution of grid-based services for Diffusion Tensor Image analysis

M. W. A. Caan; S. Shahand; F. M. Vos; A. H. C. van Kampen; S. D. Olabarriaga

doi:10.1016/j.future.2012.03.007

Evolution of grid-based services for Diffusion Tensor Image analysis

M. W. A. Caan
, S. Shahand
, F. M. Vos
, A. H. C. van Kampen
, S. D. Olabarriaga

Research output: Contribution to journal › Article › Academic › peer-review

Abstract

Analyzing Diffusion Tensor Image data of the human brain of large study groups is complex and demands new, sophisticated and computationally intensive pipelines that can efficiently be executed. We present our progress over the past five years in the development and porting of the DTI analysis pipeline to a grid infrastructure. Starting with simple jobs submitted from the command-line, we moved towards a workflow-based implementation and finally into the e-BioInfra Gateway, which offers a web interface for the execution of selected biomedical data analysis software on the Dutch Grid. This gateway is currently being actively used by neuroscientists and for educational purposes. (C) 2012 Elsevier B.V. All rights reserved

Original language	English
Pages (from-to)	1194-1204
Journal	FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF GRID COMPUTING AND ESCIENCE
Volume	28
Issue number	8
DOIs	https://doi.org/10.1016/j.future.2012.03.007
Publication status	Published - 2012

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abstract = "Analyzing Diffusion Tensor Image data of the human brain of large study groups is complex and demands new, sophisticated and computationally intensive pipelines that can efficiently be executed. We present our progress over the past five years in the development and porting of the DTI analysis pipeline to a grid infrastructure. Starting with simple jobs submitted from the command-line, we moved towards a workflow-based implementation and finally into the e-BioInfra Gateway, which offers a web interface for the execution of selected biomedical data analysis software on the Dutch Grid. This gateway is currently being actively used by neuroscientists and for educational purposes. (C) 2012 Elsevier B.V. All rights reserved",

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AU - Shahand, S.

AU - Vos, F. M.

AU - van Kampen, A. H. C.

AU - Olabarriaga, S. D.

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JF - FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF GRID COMPUTING AND ESCIENCE

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ER -

Evolution of grid-based services for Diffusion Tensor Image analysis

Abstract

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