Personal profile
Specialisation
Barrett's esophagus, Gastro-Esophageal carcinoma, Artificial Intelligence, Endoscopic Resection Therapy, Immunotherapy
Research interests
My current research aims to improve the clinical care of patients with Barrett’s Esophagus (BE) and esophageal cancer. To achieve this we integrate expert histopathology images assessment with Artificial Intelligence (AI) for objective diagnosis and patient tailored risk stratification.
Nationwide Barrett’s expert histopathology review: We coordinate a nationwide expert histopathology revision platform (LANS) for BE-patients. So far, panel consensus assessment serves as basis for treatment of >850 BE patients, and results of studies have implications for clinical guidelines on diagnosis and treatment of BE.
AI-based detection and progression prediction of Barrett’s Esophagus: our computational pathology group together with AMLab & qurAI from the Informatics Institute (UvA) aims to I) develop an automated AI-based expert-histopathology classifier diagnosing BE biopsies based on the unique LANS database, and II) to identify BE lesions that progress to EAC, using AI with integrated clinical-pathology analysis, automated microenvironment analysis and time series approach.
Use AI-based histopathology image analysis to identify esophago-gastric cancer patients that benefit from immunotherapy: with Geometric and Causal Deep Learning methods we will quantify spatial distribution of multiple predictive tissue biomarkers and the tumor-immune microenvironment directly on standard pathology images that relate to clinical outcome of immunotherapy and identify features indicative of successful response.
Education/Academic qualification
PhD, Tumor-reactive T cell induction in clinical immunotherapy
Award Date: 27 Feb 2004
Keywords
- RB Pathology
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 3 Good Health and Well-being
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Collaborations and top research areas from the last five years
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Histopathologist features predictive of diagnostic concordance at expert level among a large international sample of pathologists diagnosing Barrett's dysplasia using digital pathology
van der Wel, M. J., Coleman, H. G., Bergman, J. J. G. H. M., Jansen, M. & Meijer, S. L., 2019, In: Gut. 318985.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile11 Downloads (Pure) -
Machine learning for grading and prognosis of esophageal dysplasia using mass spectrometry and histological imaging
Beuque, M., Martin-Lorenzo, M., Balluff, B., Woodruff, H. C., Lucas, M., de Bruin, D. M., van Timmeren, J. E., Boer, O. J. D., Heeren, R. M., Meijer, S. L. & Lambin, P., Nov 2021, In: Computers in biology and medicine. 138, p. 104918 104918.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
Histopathological classification of precursor lesions of esophageal adenocarcinoma: A Deep Multiple Instance Learning Approach
Tomczak, J., Ilse, M., Welling, M., Jansen, M., Coleman, H., Lucas, M., de Laat, K., Marquering, H., van der Wel, M., de Boer, O., Savci-Heijink, D. & Meijer, S. L., 2018, 3 p.Research output: Working paper › Academic
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Development of benchmark quality criteria for assessing whole-endoscopy Barrett's esophagus biopsy cases
van der Wel, M. J., Duits, L. C., Klaver, E., Pouw, R. E., Seldenrijk, C. A., Offerhaus, G. J. A., Visser, M., ten Kate, F. J. W., Tijssen, J. G., Bergman, J. J. G. H. M. & Meijer, S. L., Jul 2018, In: United European gastroenterology journal. 6, 6, p. 830-837 8 p.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile6 Downloads (Pure) -
Significant variation in histopathological assessment of endoscopic resections for Barrett's neoplasia suggests need for consensus reporting: propositions for improvement
van der Wel, M. J., Klaver, E., Pouw, R. E., Brosens, L. A. A., Biermann, K., Doukas, M., Huysentruyt, C., Karrenbeld, A., ten Kate, F. J. W., Kats-Ugurlu, G., van der Laan, J., van Lijnschoten, I., Moll, F. C. P., Offerhaus, G. J. A., Ooms, A. H. A. G., Seldenrijk, C. A., Visser, M., Tijssen, J. G., Meijer, S. L. & Bergman, J. J. G. H. M., 24 Dec 2021, In: Diseases of the esophagus : official journal of the International Society for Diseases of the Esophagus. 34, 12Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile14 Downloads (Pure)