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Dive into the research topics where Margaretha Bakker is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
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Research output
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HIV-phyloTSI: subtype-independent estimation of time since HIV-1 infection for cross-sectional measures of population incidence using deep sequence data
the HPTN 071 (PopART) Phylogenetics protocol team, the BEEHIVE consortium and the PANGEA consortium, 1 Dec 2025, In: BMC bioinformatics. 26, 1, 212.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile15 Downloads (Pure) -
Incidence of hepatitis C virus infection and associated determinants among men who have sex with men without HIV in Amsterdam, the Netherlands, between 2012 and 2021
Hage, K., Koole, J., Boyd, A., Matser, A., Davidovich, U., Bakker, M., van der Hoek, L., Koopsen, J., Rebers, S., Schinkel, J. & Prins, M., 1 Oct 2025, In: European Journal of Gastroenterology and Hepatology. 37, 10, p. 1173-1179 7 p., 3008.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile18 Downloads (Pure) -
The genetic architecture of HIV-1 virulence
Blanquart, F., Wymant, C., Hall, M., Power, R., Golubchik, T., Gall, A., de Cesare, M., Macintyre-Cockett, G., Bakker, M., Bezemer, D., Gabrielaite, M., Ong, S. H., Kendall, M., Sauter, R., Bannert, N., Fellay, J., Grabowski, M. K., Gunsenheimer-Bartmeyer, B., Günthard, H. F. & Kivelä, P. & 13 others, , 2025, In: Virus evolution. 11, 1, veaf057.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile17 Downloads (Pure) -
Untreated HIV-1 infection and low CD4+ T cell counts and their effect on endemic human coronavirus (re)infection
Sechan, F., van den Hurk, A. W. M., Boender, T. S., Prins, M., Matser, A., Bakker, M., Kootstra, N. A. & van der Hoek, L., 1 Jun 2025, In: PLOS global public health. 5, 6 June, e0004610.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile19 Downloads (Pure) -
Determinants of epidemic size and the impacts of lulls in seasonal influenza virus circulation
de Jong, S. P. J., Felix Garza, Z. C., Gibson, J. C., van Leeuwen, S., de Vries, R. P., Boons, G.-J., van Hoesel, M., de Haan, K., van Groeningen, L. E., Hulme, K. D., van Willigen, H. D. G., Wynberg, E., de Bree, G. J., Matser, A., Bakker, M., van der Hoek, L., Prins, M., Kootstra, N. A., Eggink, D. & Nichols, B. E. & 3 others, , Dec 2024, In: Nature communications. 15, 1, p. 591 591.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile23 Downloads (Pure)