Personal profile
Research interests
I lead the Data Hub of the Amsterdam UMC Advanced Compute and Data Core (ACDC) initiative, to enable reproducible and FAIR multi-omics and visual omics research. I also lead the data and analysis nodes of the NL-Bioimaging and EMPower Large Scale Research Infrastructures.
I am a bioinformatician, specialising in data and knowledge integration. I was involved in defining the FAIR Principles (that data should be Findable, Accessible, Interoperable and Reusable), and my research focuses on exploiting FAIR data and enabling reproducible research.
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Collaborations and top research areas from the last five years
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Lifestyle behaviour change of patients following cardiac rehabilitation: the BENEFIT intervention study with one-year follow-up
Breeman, L. D., Janssen, V. R., Kraaijenhagen, R. A., Al-Dhahir, I., IJzerman, R. V. H., Wolstencroft, K., Kraaij, W., Bonten, T. N., Atsma, D. E., Chavannes, N. H., van Gemert-Pijnen, L., Kemps, H. M. C., Scholte Op Reimer, W. & Evers, A. W. M., 9 Apr 2025, (E-pub ahead of print) In: European journal of preventive cardiology.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile1276 Downloads (Pure) -
Restructuring Knowledge Graphs with Conceptual Models: Implications for Machine Learning Predictions in Drug Repurposing
Bernabé, C. S., Zwart, R., Perdomo-Quinteiro, P., Jacobsen, A., Sales, T. P., Queralt-Rosinach, N. R., Wolstencroft, K., Santos, L. O. B. D. S., Mons, B. & Roos, M., 2025, Advanced Information Systems Engineering - 37th International Conference, CAiSE 2025, Proceedings. Krogstie, J., Rinderle-Ma, S., Kappel, G. & Proper, H. A. (eds.). Springer Science and Business Media Deutschland GmbH, Vol. 15702 LNCS. p. 297-313 17 p. (Lecture Notes in Computer Science; vol. 15702 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review
Open AccessFile21 Downloads (Pure) -
Automated drug repurposing workflow for rare diseases
Reep, C. A. T., Wolstencroft, K., Mina, E. & Queralt-Rosinach, N., 2024, p. 88-106. 19 p.Research output: Contribution to conference › Paper › Academic
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Exploring the Evolution of the Gene Ontology and its Impact on Enrichment Analysis
Chen, Y., Takes, F. W., Verbeek, F. J. & Wolstencroft, K. J., 2024.Research output: Contribution to conference › Paper › Academic
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Systems Biology in ELIXIR: modelling in the spotlight
Martins dos Santos, V., Anton, M., Szomolay, B., Ostaszewski, M., Arts, I., Benfeitas, R., Dominguez Del Angel, V., Domínguez-Romero, E., Ferk, P., Fey, D., Goble, C., Golebiewski, M., Gruden, K., Heil, K. F., Hermjakob, H., Kahlem, P., Klapa, M. I., Koehorst, J., Kolodkin, A. & Kutmon, M. & 18 others, , 2024, In: F1000Research. 11, ELIXIR-1265.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile56 Downloads (Pure)