Personal profile
Specialisation
Mathematical and statistical modelling of human microbiota and infectious diseases
Research interests
Microbial ecology, multi-strain pathogens, antimicrobial resistance, viral oncology, vaccination, screening, study design, health economics
Education/Academic qualification
PhD, Clinical Epidemiology & Biostatistics, University of Amsterdam
Master, Theoretical Biology & Bioinformatics, Utrecht University, Utrecht, Netherlands
External positions
Methodology & Statistics Consultant, AMC-UvA, Netherlands
Senior Scientist, RIVM/Centre for Infectious Disease Control Netherlands
… → 2020
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 3 Good Health and Well-being -
SDG 4 Quality Education -
SDG 10 Reduced Inequalities
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Collaborations and top research areas from the last five years
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Heterogeneous associations of gut microbiota with Crohn's disease activity
Pinto, S., Benincà, E., Galazzo, G., Jonkers, D., Penders, J. & Bogaards, J. A., 1 Jan 2024, In: Gut microbes. 16, 1, p. 2292239 2292239.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile34 Downloads (Pure) -
Wavelet clustering analysis as a tool for characterizing community structure in the human microbiome
Benincà, E., Pinto, S., Cazelles, B., Fuentes, S., Shetty, S. & Bogaards, J. A., 1 Dec 2023, In: Scientific reports. 13, 1, 8042.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile27 Downloads (Pure) -
Health and economic effects of introducing single-dose or two-dose human papillomavirus vaccination in India
De Carvalho, T. M., Man, I., Georges, D., Saraswati, L. R., Bhandari, P., Kataria, I., Siddiqui, M., Muwonge, R., Lucas, E., Sankaranarayanan, R., Basu, P., Berkhof, J., Baussano, I. & Bogaards, J. A., 6 Nov 2023, In: BMJ global health. 8, 11, e012580.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile11 Downloads (Pure) -
Reconstructing multi-strain pathogen interactions from cross-sectional survey data via statistical network inference
Man, I., Benincà, E., Kretzschmar, M. E. & Bogaards, J. A., 9 Aug 2023, In: Journal of the Royal Society, Interface. 20, 205, p. 20220912 1 p., 20220912.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile18 Downloads (Pure) -
Species abundance correlations carry limited information about microbial network interactions
Pinto, S., Benincà, E., van Nes, E. H., Scheffer, M. & Bogaards, J. A., Sept 2022, In: PLoS computational biology. 18, 9, p. e1010491 e1010491.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile24 Downloads (Pure)
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BMC medicine (Journal)
Bogaards, H. (Editor)
1 Mar 2024 → …Activity: Publication peer-review and editorial work › publication_peer_review
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Workshop on human microbiome & e-DNA research for public health & the environment
Bogaards, H. (Organiser), Benincà, E. (Organiser), Fuentes, S. (Organiser), Janse, I. (Organiser) & Franz, E. (Organiser)
26 Sept 2022Activity: Participating in or organising an event › organising
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2nd Workshop on Multi-strain Pathogen Dynamics
Bogaards, H. (Organiser) & van Boven, M. (Organiser)
10 Oct 2019Activity: Participating in or organising an event › organising
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EUROGIN2017
Bogaards, H. (Member of programme committee)
8 Oct 2017Activity: Participating in or organising an event › organising
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Workshop on Multi-strain Pathogen Dynamics
Bogaards, H. (Organiser)
15 Sept 2016Activity: Participating in or organising an event › organising