Personal profile
Research interests
- Bioinformatics and systems biology
- Computational modelling
- Single cell RNAseq and network reconstruction
- Immunology
Specialisation
Bioinformatics and computational modelling
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Collaborations and top research areas from the last five years
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Heterozygous missense mutations in SMARCA2 cause Nicolaides-Baraitser syndrome
van Houdt, J. K. J., Nowakowska, B. A., Sousa, S. B., van Schaik, B. D. C., Seuntjens, E., Avonce, N., Sifrim, A., Abdul-Rahman, O. A., van den Boogaard, M.-J. H., Bottani, A., Castori, M., Cormier-Daire, V., Deardorff, M. A., Filges, I., Fryer, A., Fryns, J.-P., Gana, S., Garavelli, L., Gillessen-Kaesbach, G. & Hall, B. D. & 29 others, , 2012, In: Nature genetics. 44, 4, p. 445-U261Research output: Contribution to journal › Article › Academic › peer-review
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Rheumatoid arthritis synovial tissue harbours dominant B-cell and plasma-cell clones associated with autoreactivity
Doorenspleet, M. E., Klarenbeek, P. L., de Hair, M. J. H., van Schaik, B. D. C., Esveldt, R. E. E., van Kampen, A. H. C., Gerlag, D. M., Musters, A. [., Baas, F., Tak, P. P. & de Vries, N. [., 2014, In: Annals of the rheumatic diseases. 73, 4, p. 756-762Research output: Contribution to journal › Article › Academic › peer-review
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MetDFBA: incorporating time-resolved metabolomics measurements into dynamic flux balance analysis
Willemsen, A. M., Hendrickx, D. M., Hoefsloot, H. C. J., Hendriks, M. M. W. B., Wahl, S. A., Teusink, B., Smilde, A. K. & van Kampen, A. H. C., 2015, In: Molecular bioSystems. 11, 1, p. 137-145Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile5 Downloads (Pure) -
Knowledge representation in metabolic pathway databases
Stobbe, M. D., Jansen, G. A., Moerland, P. D. & van Kampen, A. H. C., 2014, In: Briefings in bioinformatics. 15, 3, p. 455-470Research output: Contribution to journal › Article › Academic › peer-review
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Computational Model Reveals Limited Correlation between Germinal Center B-Cell Subclone Abundancy and Affinity: Implications for Repertoire Sequencing
Reshetova, P., van Schaik, B. D. C., Klarenbeek, P. L., Doorenspleet, M. E., Esveldt, R. E. E., Tak, P.-P., Guikema, J. E. J., de Vries, N. & van Kampen, A. H. C., 2017, In: Frontiers in immunology. 8, p. 221Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile11 Downloads (Pure)
Datasets
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Additional file 3: Table S1. of Low-power photodynamic therapy induces survival signaling in perihilar cholangiocarcinoma cells
Weijer, R. (Creator), Broekgaarden, M. (Creator), van Golen, R. F. (Contributor), Bulle, E. (Creator), Nieuwenhuis, E. (Creator), Jongejan, A. (Creator), Moerland, P. D. (Creator), van Kampen, A. H. C. (Contributor), van Gulik, T. M. (Contributor) & Heger, M. (Creator), Figshare, 2015
DOI: 10.6084/m9.figshare.c.3642659_d5, https://springernature.figshare.com/articles/dataset/Additional_file_3_Table_S1_of_Low-power_photodynamic_therapy_induces_survival_signaling_in_perihilar_cholangiocarcinoma_cells/4463093
Dataset
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Additional file 3: Table S1. of Low-power photodynamic therapy induces survival signaling in perihilar cholangiocarcinoma cells
Weijer, R. (Creator), Broekgaarden, M. (Creator), van Golen, R. F. (Contributor), Bulle, E. (Creator), Nieuwenhuis, E. (Creator), Jongejan, A. (Creator), Moerland, P. D. (Creator), van Kampen, A. H. C. (Contributor), van Gulik, T. M. (Contributor) & Heger, M. (Creator), Figshare, 2015
DOI: 10.6084/m9.figshare.c.3642659_d5.v1, https://springernature.figshare.com/articles/dataset/Additional_file_3_Table_S1_of_Low-power_photodynamic_therapy_induces_survival_signaling_in_perihilar_cholangiocarcinoma_cells/4463093/1
Dataset