Description
Nextflow-based image segmentation pipeline that can automatically process raw images to single cell data, making use of open source softwares imctools, CellProfiler and Ilastik.
| Date made available | 2021 |
|---|---|
| Publisher | nf-core |
Research output
- 1 Article
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Characterisation of tumour microenvironment remodelling following oncogene inhibition in preclinical studies with imaging mass cytometry
van Maldegem, F., Valand, K., Cole, M., Patel, H., Angelova, M., Rana, S., Colliver, E., Enfield, K., Bah, N., Kelly, G., Tsang, V. S. K., Mugarza, E., Moore, C., Hobson, P., Levi, D., Molina-Arcas, M., Swanton, C. & Downward, J., Oct 2021, In: Nature communications. 12, 1, 5906.Research output: Contribution to journal › Article › Academic › peer-review
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